Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015841353.1_cds_XP_016507943.1_21014
CDS Infomation	[gene=LOC107825586] [db_xref=GeneID:107825586] [protein=LOW QUALITY PROTEIN: phytochrome E-like] [exception=unclassified translation discrepancy] [protein_id=XP_016507943.1] [location=join(32962..34588,34591..35052,35574..36375,37101..37394,37799..38048)] [gbkey=CDS]
Sequence	ATGGAGTTTCAGAGCAGCAGCAAAGCCAAAAGAAAAGCAAGACCCACTAGCCATAATCTC CAAAACAACAAGAATTCTAACAAAGATTCAACCTTTTCTTCCTCTGCTGCTAGTAACATG AACAACAACAACAACAACAACAATACTAGCAAGGCAACTATGGCTCAGTACAATGCTGAT GCTAAGCTCATGGCTGAGTTTGAACAGTCTGGTGTCTCTGGTAAGTCCTTTAATTATTCA AGATCAGTACTTTATGCACCTCAGGATAATGCCAATGAAGAAGAAATCACTTCTTATCTT TCAAGAATTCAAAGGGGTGGGCTTGTTCAACCATTTGGTTGTATGCTTGCTATTGAGGAA CATACTTTCAAGATTATAGGTTACAGTGAGAATTGCTTTGATATGTTAGGTTTTAAGATT GCTGAGTCATCAAAGTTGATTACTTTGATTGGTGTTGATGCTAGAACCCTTTTCACCCCT TCTTCTGGGGCTTCATTGGCTAAAGCCATGACTTCTAGGGAAATCTCTTTGTTGAACCCT ATATGGGTTCATTCTAGGAGTACCCATAAGCCTTTTTATGCTATACTTCACAGGATTGAT GTGGGGATTGTGATTGATTTAGAGCCTGCTAATTCTAGTGACCCTGCATTGCTGCTTGCT GGGGCAGTGCAGTCACAAAAACTGGCTGTCCGGTCGATATCTAGGTTGCAGTCACTACCT GGTGGAGATATAGGGGTTCTGTGTGATACAGTGGTGGAAGATGTGCAGAAGCTGACTGGA TATGATAGGGTGATGGTTTATAAGTTTCATGATGATAATCATGGTGAAGTTCTGTCTGAG ATTAGGAGATCAGAATTGGAACCTTATTTGGGCTTGCATTATCCTGCAACAGATATCCCC CAAGCTGCCCGGTTCTTGTTCAAGCAGAACAGAATTAGGATGATATGTGATTGCAATGCA CAGCCTGTTAAGATTGTTCAGAGTGAAGAACTAAAGCGGCCTCTCTGCTTGGTAAATTCG ACTCTTAGATCACCTCATGGCTGCCATGCACAGTATATGGCCAACATGGGATCTATTTCA TCGTTGGTGATGTCAGTAGTTATCAATAGCAGTGATTTGAGGAAGCTTTGGGGTTTGGTT GTTTGTCATCACAGTACTCCCCGCTATGTGCCTTTCCCACTTCGGTATGCATGTGAATTC TTCATGCAGGCATTTGGCCTGCAGCTTTATATGGAGCTCCAATTAGCATCACAGTTGGCG GAGAAGAAAACCCTCCAAATGCAGACCTTATTATGTGACATGCTTCTTCGAGATGTTCCA TTTGGCATTGTAACACAATCCCCTAGTATTATGGATCTTGTCAAGTGCGATGGAGCTGCA CTTTATTACGGTGGAAAATGTTGGTTGCTTGGGGTGACACCAACTGAAGCACAAGTTAAA GATATTGCAGAGTGGTTGCTAGGCACTCATAAGGACTCGACAGGTTTAAGTACGGACAGT CTTGCAGATGCTGGTTATCCTGGTGCAACTTTACTGGGAGATGAAGTTTGTGGCATGGCT ACTGCGAGAATTACTTCCAAGGATTTCCTATTCTGGTTCAGGTCTCACACGGCAAAGGAA GTCAAGTGAGGTGCTAAGCATCATCCAGATGATAGAGATGATGGAGGAAAAATGCACCCG CGATCTTCATTTAATGCCTTTCTTGAAGTGGTTAAAAGTAGAAGTATGCCTTGGGATGTT CCGGAGATTAATGCCATTCATTCTCTACAAATCATAATGAGAGAATCAATTCAAGAAATC GAGAACAGTTCTCTGAAAACTATGACTTCTTCTCAACAGAATGATGCTGATGGTCCAAGC ATGGATGAACTTAGTTCTGTGGCAATGGAAATGGTTAGGTTGATTGAGACGGCCACTGCT CCAATTTTTGGAGTTGATCTATCTGGCTTAATAAATGGATGGAATGGGAAGATTGCTGAC TTGACAGGGTTGCAAGCTAGTGAAGCTATTGGAAAGTCTCTCATTAATGATATTGCTCAT GAAGATTCACATGAAACTGTTGAAAAAGTTCTACATAGAGCTCTGTTAGGTGAGGAGGAC AAAAATGTGGAAATAAAGTTGCGAAGGTTTGGGAAAGATCCACCAAAATCAGTTTTATAC CTTGTGACTAATACCTGCACAAGCAGGGACCACAAAAATGATGTTGTTGGCGTGTGCTTT GTGGCTCAAGATGTCACTCCTGAAAAAGCTGTCATGGATAAATTTATTCAGTTGCAAGGA GATTATGAGGCTATTGTACAAAGTCTTAATCCACTGATTCCACCAATATTTGCTTCTGAT GGAAATGCTTGCTGTTCGGAGTGGAATGCAGCGATGGAAAGGTTGACCGGTTGGACAAGA TATGAGATCCTGGGGAGGACACTTCCTGGTGAAGTTTTTGGTGGTCTTTGTCGTCTTAGG GGACAAGATGCCGTTACCAAATTTATGATTCTTTTCTACCAAGCAATTAGTGGCCATGAC ACCAAAAAGCTTCCATTTGGCTTTTTTAATAGGACAGGGGAGTTTGTGGAAGTGTTCCTA ACAGCAAACAAGAGAACTGATGAGCATGGGAATATAATTGGGTGTTTCTGCTTCTTGCAG CCTACACTGGTTGACCCAGAGGCATCGGATGAGAGACAAGACAATAAAGACTCCCTTTCA AAAATTAAAGAATTTTCTTATATCCGACAGCAGATGAAAAATCCATTGAACGGGATCCAG TTTACCCATAAACTCCTTGAAGCAACCTGTGTTTCAGATAATCAGAAGCAGCTTCTGGAG ACAAGTGAAGCCTGTGAGAAACAGATACTATCTGTTATTGACAATATGGATTTTGGAAGA ATAGAGGATGGCAAAGTGGAGCTAAACATGGAGGAATTCGTTCTAGGAAATGTTGTGGAT GCTATTGTGAGTCAAGTAATGATTTTGCTCAAGGAAAAAAATTTACAACTGCTGCATGAT ATTCCTGACCAGATCAAGACTCTTCCTCTATATGGTGATCAAATTAAGCTTCAGCTTATT CTCTCAGATTTCTTGCTTAGTATAGTGCATCATGCACCTTCCCCGGATGGTTGGGTGGAA ATCAAGGTGTTACCTGGTCTGAAACTCATACAAGATGGAAATGAATTTATCCATCTCCAA TTCAGAATGACTCACCCTGGCCAAGGACTACCGGCTGCTCTAATCGAAGACATGTCTGGA GGAAGAAATAGAGGGACAACACAAGAAGGAATCGCGCTAAATTTTTCCCAGAAACTTGTC AATATGATGAATGGGCATGTCCGCTATGTCAGAGAGGAAAACAAATGTTATTTCCTAATA GACCTGGAACTCAAAACAGGGAAATCTACACAACATGGTCCAGATTCGGATGGAACTGAA AAGATGGAAATTTAG

Peptide Sequence

PEP ID	XP_016507943.1
PEP Infomation	PREDICTED: LOW QUALITY PROTEIN: phytochrome E-like [Nicotiana tabacum]
Sequence	MEFQSSSKAKRKARPTSHNLQNNKNSNKDSTFSSSAASNMNNNNNNNNTSKATMAQYNAD AKLMAEFEQSGVSGKSFNYSRSVLYAPQDNANEEEITSYLSRIQRGGLVQPFGCMLAIEE HTFKIIGYSENCFDMLGFKIAESSKLITLIGVDARTLFTPSSGASLAKAMTSREISLLNP IWVHSRSTHKPFYAILHRIDVGIVIDLEPANSSDPALLLAGAVQSQKLAVRSISRLQSLP GGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDNHGEVLSEIRRSELEPYLGLHYPATDIP QAARFLFKQNRIRMICDCNAQPVKIVQSEELKRPLCLVNSTLRSPHGCHAQYMANMGSIS SLVMSVVINSSDLRKLWGLVVCHHSTPRYVPFPLRYACEFFMQAFGLQLYMELQLASQLA EKKTLQMQTLLCDMLLRDVPFGIVTQSPSIMDLVKCDGAALYYGGKCWLLGVTPTEAQVK DIAEWLLGTHKDSTGLSTDSLADAGYPGATLLGDEVCGMATARITSKDFLFWFRSHTAKE VKWXGAKHHPDDRDDGGKMHPRSSFNAFLEVVKSRSMPWDVPEINAIHSLQIIMRESIQE IENSSLKTMTSSQQNDADGPSMDELSSVAMEMVRLIETATAPIFGVDLSGLINGWNGKIA DLTGLQASEAIGKSLINDIAHEDSHETVEKVLHRALLGEEDKNVEIKLRRFGKDPPKSVL YLVTNTCTSRDHKNDVVGVCFVAQDVTPEKAVMDKFIQLQGDYEAIVQSLNPLIPPIFAS DGNACCSEWNAAMERLTGWTRYEILGRTLPGEVFGGLCRLRGQDAVTKFMILFYQAISGH DTKKLPFGFFNRTGEFVEVFLTANKRTDEHGNIIGCFCFLQPTLVDPEASDERQDNKDSL SKIKEFSYIRQQMKNPLNGIQFTHKLLEATCVSDNQKQLLETSEACEKQILSVIDNMDFG RIEDGKVELNMEEFVLGNVVDAIVSQVMILLKEKNLQLLHDIPDQIKTLPLYGDQIKLQL ILSDFLLSIVHHAPSPDGWVEIKVLPGLKLIQDGNEFIHLQFRMTHPGQGLPAALIEDMS GGRNRGTTQEGIALNFSQKLVNMMNGHVRYVREENKCYFLIDLELKTGKSTQHGPDSDGT EKMEI

Transcript Sequence

Gene sequence data has not been registered.